Nextflow and nf-core workshop by CRG
Reproducible genomics workflows using Nextflow and nf-core
Repository for the BovReg Nextflow workshop organized by the CRG on 17-20 November 2020.
- Introduction to Nextflow – Evan Floden (Day 1_1)
- Flash talks – Speakers: Daniel Fischer (Day 1_2)
- Introduction to nf-core – Phil Ewels (Day 2_1)
- Flash talks -Speakers: S. Jayaraman, Manthri B. Kiran, Meenu Bhati & Praveen K. Chitneedi (Day 2_2)
- Nf-core pipelines – Harshil Patel (Day 3_1)
- Flash talks – Speakers: Andreia Amaral, Gabriel Moreira and Tuan Nguyen (Day 3_2)
- Developing with nf-core – Phil Ewels (Day 3_3)
- Introduction to DSL2 – Paolo Di Tommaso (Day 4_1)
- Flash talks – Speakers: Cyril Kurylo, Yuliaxis Ramayo Caldas & Jani de Vos (Day 4_2)
- Master of Pores, a Nanopore data processing pipeline – Luca Cozzuto (Day 4_3)